feat: start switching to new cloudnative-pg, remove label selectors for prometheus stack resources

kubernetes/main/apps/database/kustomization.yaml

@@ -3,7 +3,7 @@ kind: Kustomization
 resources:
 - ./namespace.yaml
 #- ./network_policy.yaml
-- ./postgresql
+- ./postgresql/ks.yaml
 - ./redis
 - ./minio
 - ./mysql

kubernetes/main/apps/database/postgresql/app/helm-release.yaml

@@ -0,0 +1,37 @@
+---
+# yaml-language-server: $schema=https://kubernetes-schemas.pages.dev/helm.toolkit.fluxcd.io/helmrelease_v2.json
+apiVersion: helm.toolkit.fluxcd.io/v2
+kind: HelmRelease
+metadata:
+  name: cloudnative-pg
+  namespace: database
+spec:
+  interval: 30m
+  chart:
+    spec:
+      chart: cloudnative-pg
+      version: 0.22.0
+      sourceRef:
+        kind: HelmRepository
+        name: cloudnative-pg
+        namespace: flux-system
+  install:
+    remediation:
+      retries: 3
+  upgrade:
+    cleanupOnFail: true
+    remediation:
+      strategy: rollback
+      retries: 3
+  dependsOn:
+    - name: minio
+      namespace: database
+    - name: openebs
+      namespace: openebs-system
+  values:
+    crds:
+      create: true
+    monitoring:
+      podMonitorEnabled: false
+      grafanaDashboard:
+        create: true

kubernetes/main/apps/database/postgresql/app/helm-repository.yaml

@@ -1,8 +1,8 @@
 apiVersion: source.toolkit.fluxcd.io/v1
 kind: HelmRepository
 metadata:
-  name: runix-charts
+  name: cloudnative-pg
   namespace: flux-system
 spec:
-  interval: 1m
+  interval: 2h
-  url: https://helm.runix.net
+  url: https://cloudnative-pg.io/charts

kubernetes/main/apps/database/postgresql/app/kustomization.yaml

@@ -1,6 +1,6 @@
 apiVersion: kustomize.config.k8s.io/v1beta1
 kind: Kustomization
 resources:
-- ./pgadmin4.sops.yaml
+- ./secret.sops.yaml
 - ./helm-repository.yaml
 - ./helm-release.yaml

kubernetes/main/apps/database/postgresql/app/secret.sops.yaml

@@ -0,0 +1,76 @@
+apiVersion: v1
+kind: Secret
+metadata:
+    name: cloudnative-pg-secret
+    namespace: database
+    labels:
+        cnpg.io/reload: "true"
+stringData:
+    username: ENC[AES256_GCM,data:SZUXJOMnDmI=,iv:huI5AHvtfU6aCo6drbdZxJ2QwOGwKAd4CfSi8WWUQHU=,tag:fIETu/Yyx01raNTnmBt8AA==,type:str]
+    password: ENC[AES256_GCM,data:qlcpDS3RhNtSowFuMYlpL11WdR4tZK9M3eZug9TerA4=,iv:9d7ChBA4VcFRszCm3rfPJSYESK2it/dryK0TetDM2Ns=,tag:Z7EI76aBEltrUym/T8MuiA==,type:str]
+    minioAccessKey: ENC[AES256_GCM,data:CsmN8wuSLLOtiA0PWeaWuw==,iv:oRNB1nhRPH7fRf98exEZ7lGSpvqVRx4l+tQyjPU2rog=,tag:Gx9SRd2UnHNgBiVtalrHAA==,type:str]
+    minioSecretKey: ENC[AES256_GCM,data:gW5lUoSY2oTLhczB0CySIOadmrltk+zMpYJ6XPRQmtI=,iv:NfnjIwfILvCS99tUdHbCvJwztNPpT8ne4oAg4yOjgFM=,tag:kC6EKVPCGbQxwKySjkgYhw==,type:str]
+sops:
+    kms: []
+    gcp_kms: []
+    azure_kv: []
+    hc_vault: []
+    age: []
+    lastmodified: "2024-10-16T23:46:50Z"
+    mac: ENC[AES256_GCM,data:1j9tp3Z30k3LC40djCriXYr78LLmSAUkssqBJgk/RKDt6eHbBPwtUhzmLewF8dSxo2shLl/jzKPCsL8HP+kHSvL9bCtrgDBnIEJabGISAHDTDBXkLB+uzVlfx0diDbX0fpZZNBSPCzFHYiebGqY1scUVsN1sBOPxUNrbIi9iKro=,iv:rYsu3+KPmuXBAp/ciYmojj3LEBL8F6PjwXQ1pmJVm5c=,tag:d3r+p29s4POVhCKeAal1cg==,type:str]
+    pgp:
+        - created_at: "2024-10-16T23:46:50Z"
+          enc: |-
+            -----BEGIN PGP MESSAGE-----
+
+            hQIMAwAAAAAAAAAAAQ/8CSIYw9BE0BxpPpMtJ9xK6xTHIuWnlWAOwhugvLal6i5T
+            xPFPfRH0uJp9fhayw//pvGz+4JaoqjcHymxEVtqWhAlFRo1WZdllAx97svKySZpC
+            WxtpEZhur1iwaylKLUinxaltGxumIGD6pGw8VowlyFic944SKqgJAfM8myuddnAk
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+            dXeV4tC4
+            =xH0Y
+            -----END PGP MESSAGE-----
+          fp: BD1AAF9D8170F4BEE437365FF6F0933799CFEBCD
+        - created_at: "2024-10-16T23:46:50Z"
+          enc: |-
+            -----BEGIN PGP MESSAGE-----
+
+            hQIMAwAAAAAAAAAAAQ/+Im71eAhkMXAiemDau+TBGU3DEsw9LrdmOPvODknhmUF5
+            kONOLSDoN9C4F36iGhFrnAFBa/Z/y3wgZdzgSdFZaXjZyja9aRzwu0eC5jfniR/6
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+            BhnMEZd1cw==
+            =txQ7
+            -----END PGP MESSAGE-----
+          fp: 687802D4DFD8AA82EA55666CF7DADAC782D7663D
+    encrypted_regex: ^(data|stringData)$
+    version: 3.9.1

kubernetes/main/apps/database/postgresql/cert.yaml

@@ -1,17 +0,0 @@
-apiVersion: cert-manager.io/v1
-kind: Certificate
-metadata:
-  name: postgres-cert
-  namespace: database
-spec:
-  secretName: postgres-cert
-
-  duration: 2160h # 90d
-  renewBefore: 360h # 15d
-
-  issuerRef:
-    name: ca-issuer
-    kind: ClusterIssuer
-
-  dnsNames:
-  - postgresql.database

kubernetes/main/apps/database/postgresql/cluster/cluster16.yaml

@@ -0,0 +1,83 @@
+---
+# yaml-language-server: $schema=https://kubernetes-schemas.pages.dev/postgresql.cnpg.io/cluster_v1.json
+apiVersion: postgresql.cnpg.io/v1
+kind: Cluster
+metadata:
+  name: postgres16
+  namespace: database
+spec:
+  instances: 3
+  imageName: ghcr.io/cloudnative-pg/postgresql:16.4-28
+  primaryUpdateStrategy: unsupervised
+  storage:
+    size: 20Gi
+    storageClass: openebs-zfs-mainpool
+  superuserSecret:
+    name: cloudnative-pg-secret
+  enableSuperuserAccess: true
+  postgresql:
+    parameters:
+      max_connections: "400"
+      shared_buffers: 256MB
+  nodeMaintenanceWindow:
+    inProgress: false
+    reusePVC: true
+  resources:
+    requests:
+      cpu: 500m
+    limits:
+      memory: 4Gi
+  monitoring:
+    enablePodMonitor: true
+  backup:
+    retentionPolicy: 30d
+    barmanObjectStore: &barmanObjectStore
+      data:
+        compression: bzip2
+      wal:
+        compression: bzip2
+        maxParallel: 8
+      destinationPath: s3://cloudnative-pg/
+      endpointURL: http://minio.database.svc:9000
+      # Note: serverName version needs to be inclemented
+      # when recovering from an existing cnpg cluster
+      serverName: &currentCluster postgres16-v2
+      s3Credentials:
+        accessKeyId:
+          name: cloudnative-pg-secret
+          key: minioAccessKey
+        secretAccessKey:
+          name: cloudnative-pg-secret
+          key: minioSecretKey
+
+  # Note: previousCluster needs to be set to the name of the previous
+  # cluster when recovering from an existing cnpg cluster
+  bootstrap:
+    recovery:
+      source: &previousCluster postgres16-v1
+    # initdb:
+    #   import:
+    #     type: monolith
+    #     databases:
+    #       - "*"
+    #     roles:
+    #       - "*"
+    #     source:
+    #       externalCluster: old-cluster
+
+  # Note: externalClusters is needed when recovering from an existing cnpg cluster
+  externalClusters:
+    - name: *previousCluster
+      barmanObjectStore:
+        <<: *barmanObjectStore
+        serverName: *previousCluster
+    # - name: old-cluster
+    #   connectionParameters:
+    #     # Use the correct IP or host name for the source database
+    #     host: postgresql.database.svc
+    #     user: postgres
+    #     dbname: postgres
+    #     #sslmode: require
+    #   password:
+    #     name: cloudnative-pg-secret
+    #     key: password

kubernetes/main/apps/database/postgresql/cluster/kustomization.yaml

@@ -0,0 +1,8 @@
+---
+# yaml-language-server: $schema=https://json.schemastore.org/kustomization
+apiVersion: kustomize.config.k8s.io/v1beta1
+kind: Kustomization
+resources:
+- ./cluster16.yaml
+- ./scheduledbackup.yaml
+- ./prometheusrule.yaml

kubernetes/main/apps/database/postgresql/cluster/prometheusrule.yaml

@@ -0,0 +1,76 @@
+---
+# yaml-language-server: $schema=https://kubernetes-schemas.pages.dev/monitoring.coreos.com/prometheusrule_v1.json
+apiVersion: monitoring.coreos.com/v1
+kind: PrometheusRule
+metadata:
+  name: cloudnative-pg-rules
+  labels:
+    prometheus: k8s
+    role: alert-rules
+spec:
+  groups:
+    - name: cloudnative-pg.rules
+      rules:
+        - alert: LongRunningTransaction
+          annotations:
+            description: Pod {{ $labels.pod }} is taking more than 5 minutes (300 seconds) for a query.
+            summary: A query is taking longer than 5 minutes.
+          expr: |-
+            cnpg_backends_max_tx_duration_seconds > 300
+          for: 1m
+          labels:
+            severity: warning
+        - alert: BackendsWaiting
+          annotations:
+            description: Pod {{ $labels.pod }} has been waiting for longer than 5 minutes
+            summary: If a backend is waiting for longer than 5 minutes
+          expr: |-
+            cnpg_backends_waiting_total > 300
+          for: 1m
+          labels:
+            severity: warning
+        - alert: PGDatabase
+          annotations:
+            description: Over 300,000,000 transactions from frozen xid on pod {{ $labels.pod }}
+            summary: Number of transactions from the frozen XID to the current one
+          expr: |-
+            cnpg_pg_database_xid_age > 300000000
+          for: 1m
+          labels:
+            severity: warning
+        - alert: PGReplication
+          annotations:
+            description: Standby is lagging behind by over 300 seconds (5 minutes)
+            summary: The standby is lagging behind the primary
+          expr: |-
+            cnpg_pg_replication_lag > 300
+          for: 1m
+          labels:
+            severity: warning
+        - alert: LastFailedArchiveTime
+          annotations:
+            description: Archiving failed for {{ $labels.pod }}
+            summary: Checks the last time archiving failed. Will be < 0 when it has not failed.
+          expr: |-
+            (cnpg_pg_stat_archiver_last_failed_time - cnpg_pg_stat_archiver_last_archived_time) > 1
+          for: 1m
+          labels:
+            severity: warning
+        - alert: DatabaseDeadlockConflicts
+          annotations:
+            description: There are over 10 deadlock conflicts in {{ $labels.pod }}
+            summary: Checks the number of database conflicts
+          expr: |-
+            cnpg_pg_stat_database_deadlocks > 10
+          for: 1m
+          labels:
+            severity: warning
+        - alert: ReplicaFailingReplication
+          annotations:
+            description: Replica {{ $labels.pod }} is failing to replicate
+            summary: Checks if the replica is failing to replicate
+          expr: |-
+            cnpg_pg_replication_in_recovery > cnpg_pg_replication_is_wal_receiver_up
+          for: 1m
+          labels:
+            severity: warning

kubernetes/main/apps/database/postgresql/cluster/scheduledbackup.yaml

@@ -0,0 +1,12 @@
+---
+# yaml-language-server: $schema=https://kubernetes-schemas.pages.dev/postgresql.cnpg.io/scheduledbackup_v1.json
+apiVersion: postgresql.cnpg.io/v1
+kind: ScheduledBackup
+metadata:
+  name: postgres
+spec:
+  schedule: "@daily"
+  immediate: true
+  backupOwnerReference: self
+  cluster:
+    name: postgres16

kubernetes/main/apps/database/postgresql/helm-release.yaml

@@ -1,49 +0,0 @@
-apiVersion: helm.toolkit.fluxcd.io/v2
-kind: HelmRelease
-metadata:
-  name: postgresql
-  namespace: database
-spec:
-  interval: 5m
-  chart:
-    spec:
-      chart: postgresql
-      version: 14.3.x
-      sourceRef:
-        kind: HelmRepository
-        name: bitnami-charts
-        namespace: flux-system
-  values:
-    auth:
-      existingSecret: "pgsql-secrets"
-      secretKeys:
-        adminPasswordKey: "adminPassword"
-        replicationPasswordKey: "replicationPassword"
-
-    tls:
-      enabled: true
-      certificatesSecret: postgres-cert
-      certFilename: "tls.crt"
-      certKeyFilename: "tls.key"
-
-    serviceMonitor:
-      enabled: true
-      labels:
-        release: kube-prometheus-stack
-
-    volumePermissions:
-      enabled: true
-
-    primary:
-      persistence:
-        existingClaim: "postgresql-pv-claim"
-
-      containerSecurityContext:
-        enabled: true
-        runAsUser: 10000
-
-    readReplicas:
-      containerSecurityContext:
-        enabled: true
-        runAsUser: 10000
-    

kubernetes/main/apps/database/postgresql/ks.yaml

@@ -0,0 +1,56 @@
+# yaml-language-server: $schema=https://kubernetes-schemas.pages.dev/kustomize.toolkit.fluxcd.io/kustomization_v1.json
+apiVersion: kustomize.toolkit.fluxcd.io/v1
+kind: Kustomization
+metadata:
+  name: cloudnative-pg
+  namespace: flux-system
+spec:
+  timeout: 5m
+  interval: 10m
+  path: ./kubernetes/main/apps/database/postgresql/app
+  prune: true
+  sourceRef:
+    kind: GitRepository
+    name: home-cluster
+  decryption:
+    provider: sops
+    secretRef:
+      name: sops-gpg
+  dependsOn:
+    - name: openebs
+    - name: openebs-sc
+  postBuild:
+    substituteFrom:
+      - kind: ConfigMap
+        name: cluster-settings
+      - kind: Secret
+        name: cluster-secrets
+---
+# yaml-language-server: $schema=https://kubernetes-schemas.pages.dev/kustomize.toolkit.fluxcd.io/kustomization_v1.json
+apiVersion: kustomize.toolkit.fluxcd.io/v1
+kind: Kustomization
+metadata:
+  name: cloudnative-pg-cluster
+  namespace: flux-system
+spec:
+  timeout: 5m
+  interval: 10m
+  path: ./kubernetes/main/apps/database/postgresql/cluster
+  prune: true
+  sourceRef:
+    kind: GitRepository
+    name: home-cluster
+  decryption:
+    provider: sops
+    secretRef:
+      name: sops-gpg
+  dependsOn:
+    - name: openebs
+    - name: openebs-sc
+    - name: cloudnative-pg
+  postBuild:
+    substituteFrom:
+      - kind: ConfigMap
+        name: cluster-settings
+      - kind: Secret
+        name: cluster-secrets

kubernetes/main/apps/database/postgresql/kustomization.yaml

@@ -1,8 +0,0 @@
-apiVersion: kustomize.config.k8s.io/v1beta1
-kind: Kustomization
-resources:
-- ./pgsql-pv.yaml
-- ./pgsql.sops.yaml
-- ./cert.yaml
-- ./helm-release.yaml
-#- ./pgadmin4

kubernetes/main/apps/database/postgresql/pgadmin4/helm-release.yaml

@@ -1,47 +0,0 @@
-apiVersion: helm.toolkit.fluxcd.io/v2
-kind: HelmRelease
-metadata:
-  name: pgadmin4
-  namespace: database
-spec:
-  interval: 5m
-  chart:
-    spec:
-      chart: pgadmin4
-      version: "1.29.0"
-      sourceRef:
-        kind: HelmRepository
-        name: runix-charts
-        namespace: flux-system
-  values:
-    ingress:
-      enabled: true
-      annotations:
-        cert-manager.io/cluster-issuer: letsencrypt-production
-        traefik.ingress.kubernetes.io/router.entrypoints: websecure
-      hosts:
-        - host: &host pgadm.${SECRET_NEW_DOMAIN}
-          paths:
-            - path: "/"
-              pathType: Prefix
-      tls:
-        - hosts:
-            - *host
-
-#    securityContext:
-#      runAsUser: 10000
-#      runAsGroup: 10000
-#      fsGroup: 10000
-#
-#    containerSecurityContext:
-#      enabled: true
-#      allowPrivilegeEscalation: false
-
-#    envVarsFromConfigMaps:
-#    - pgadmin4-secret
-
-    persistentVolume:
-      enabled: false
-
-    volumePermissions:
-      enabled: true

kubernetes/main/apps/database/postgresql/pgsql-pv.yaml

@@ -1,27 +0,0 @@
-apiVersion: v1
-kind: PersistentVolume
-metadata:
-  name: postgresql-pv
-  namespace: database
-spec:
-  storageClassName: hostpath
-  persistentVolumeReclaimPolicy: Retain
-  capacity:
-    storage: 12Gi
-  accessModes:
-    - ReadWriteOnce
-  hostPath:
-    path: "/mnt/MainPool/Kubernetes/databases/postgresql"
----
-apiVersion: v1
-kind: PersistentVolumeClaim
-metadata:
-  name: postgresql-pv-claim
-  namespace: database
-spec:
-  storageClassName: hostpath
-  accessModes:
-    - ReadWriteOnce
-  resources:
-    requests:
-      storage: 10Gi

kubernetes/main/apps/database/postgresql/pgsql.sops.yaml

@@ -1,62 +0,0 @@
-apiVersion: v1
-kind: Secret
-metadata:
-    name: pgsql-secrets
-    namespace: database
-stringData:
-    adminPassword: ENC[AES256_GCM,data:gJ7rl2V/VlbIIRvRHcwMaZKN87t5n8bVWZCj/tRv8Uw=,iv:b/5eEnOrHzJrtnO+E2IGwJLHy2AdJQwv9WfUR5fUHY4=,tag:nTtaDNHVfYpChQX9UWwdKA==,type:str]
-    userPassword: ENC[AES256_GCM,data:gR7q508lUaRDRJ/z5lH99JLJSS9zWfg0O+TAm2B9uvo=,iv:9DDQxwd/BGtLQDacAH/crfT+qU4Pn5sGkWuEtmMprUI=,tag:tK3WoUd7729LQDVqU7pckQ==,type:str]
-    replicationPassword: ENC[AES256_GCM,data:BSA5IfYhhvN445yp2i3BI5zlIXgdj+LejCPzvlTMnVo=,iv:Qku2NAQPLxt+NUnk2dSx1+WAoyx3aEuA3+piU2mubYk=,tag:MnI+atK6VLZUc3eGS1OE1w==,type:str]
-sops:
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-    age: []
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kubernetes/main/apps/monitoring/kube-prometheus-stack/helm-release.yaml

@@ -59,12 +59,22 @@ spec:
 
       prometheusSpec:
         enableAdminAPI: false
-
         retention: 1d
-
         remoteWrite:
         - url: http://victoria-metrics-server.monitoring.svc:8428/api/v1/write
         
+        # select everything
+        podMonitorSelectorNilUsesHelmValues: false
+        podMonitorSelector: {}
+        serviceMonitorSelectorNilUsesHelmValues: false
+        serviceMonitorSelector: {}
+        ruleSelectorNilUsesHelmValues: false
+        ruleSelector: {}
+        probeSelectorNilUsesHelmValues: false
+        probeSelector: {}
+        scrapeConfigSelectorNilUsesHelmValues: false
+        scrapeConfigSelector: {}
+
         storageSpec:
           volumeClaimTemplate:
             spec: